Brief introduction of Jimena2
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you could run jimena2.jar under windows, linux and macOS. If it fails to start, please install java 7 or java 8.
if jimena2.jar can not be recognized as an execuatable file, you could alternatively run it in the command line/console by this:
java -jar jimena2.jar

1. import your model file generated by yEd (arrow line represents the activation, whereas t-shape line indicates the inhibition)
2. run the analysis with jimena2
3. get all the steady states (stable states), in the stable state table page, initiate the Switch analyzer 


Brief tutorial for Switch Analyzer (data-driven analysis)
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1. move <filename.m> which you generated from Jimena (Switch Analyzer) to the matlab subdirectory
2. use matlab to run <filename.n> under the matlab directory
3. result will be saved into x.txt and u.txt
4. visualize x.txt and u.txt with matlab functions

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any questions, please do not hesitate to contact the authors.
