Team

bioRxiv Vorabdrucke

• Pex14p phosphorylation modulates import of citrate synthase 2 into peroxisomes in Saccharomyces cerevisiae
  Schummer A*, Maier R*, Gabay-Maskit S, Hansen T, Mühlhäuser WWD, Suppanz I, Fadel A, Schuldiner M, Girzalsky W, Oeljeklaus S, Zalckvar E, Erdmann R, Warscheid B.
  bioRxiv preprint first; doi.org/10.1101/2020.07.03.186833
  *shared first authorship
   
• Towards the molecular architecture of the peroxisomal receptor docking complex
  Lill P*, Hansen T*, Wendscheck D*, Klink BU, Jeziorek, T, Miehling, J, Bender J, Drepper F, Girzalsky W, Warscheid B°, Erdmann R°, Gatsogiannis C.
  bioRxiv preprint first; doi.org/10.1101/854497
  *shared first authorship; °equal contribution

Ausgewählte Publikationen (2007-2020)

• Phosphoproteomics identifies dual-site phosphorylation in an extended basophilic motif regulating FILIP1-mediated degradation of filamin-C.
  Reimann L*, Schwäble AN*, Fricke A, Muehlhaeuser W, Leber Y, Lohanadan K, Puchinger M, Schäuble S, Fässler E Wiese, H, Reichenbach C, Knapp B, Peikert CD, Drepper F, Hahn U, Kreutz C, van der Ven PFM, Radziwill G, Djinović-Carugo K, Fürst DO, Warscheid B (2020). 
  Commun Biol, 3:253.
   
• Defining the substrate spectrum of the TIM22 complex identifies pyruvate carrier subunits as unconventional cargos
  Gomkale R, Cruz-Zaragoza LD, Suppanz I, Guiard B, Montoya J, Pacheu-Grau D, Warscheid B, Rehling P (2020).
  Curr Biol, 30(6):1119-1127. 
   
• Ubx2 monitors the mitochondrial protein entry gate.
  Mårtensson CU, Priesnitz C, Song J, Ellenrieder L, Doan KN, Boos F, Floerchinger A, Zufall N, Oeljeklaus S, Warscheid B, Becker T (2019).
  Nature, 569:679-683. Feature Article in News & Views; Nature, 569:635-637.
   
• Mitochondrial proteins: from biogenesis to functional networks.
  Pfanner N, Warscheid B, Wiedemann N (2019).
  Nat Rev Mol Cell Bio, 20:267-284. 
   
• Quantitative proteomics identifies zinc-based redox switches for global translation modulation by mitochondrially produced reactive oxygen species.
  Topf U, Suppanz I, Samluk L, Wrobel L, Böser A, Sakowska P, Knapp B, Pietrzyk MK, Chacinska A, Warscheid B (2018).
  Nat Commun, 9:324. 
   
• Complete native stable isotope labeling by amino acids of Saccharomyces cerevisiae for global proteomic analysis.
  Dannenmaier S, Stiller S, Morgenstern M, Lübbert P, Oeljeklaus S, Wiedemann N, Warscheid B (2018).
  Anal Chem, 90:10501-10509.
   
• Definition of a high confidence mitochondrial proteome at quantitative scale.
  Morgenstern M, Stiller SB, Lübbert P, Peikert CD, Dannenmeier S, Drepper F, Weill U, Höß P, Feuerstein R, Gebert M, Bohnert M, van der Laan M, Schuldiner M, Schütze C, Oeljeklaus S, Pfanner N, Wiedemann N, Warscheid B (2017).
  Cell Rep, 9:2836-2852. 
   
• Charting organellar importomes by quantitative mass spectrometry.
  Peikert CD, Mani J, Morgenstern M, Sandro K, Knapp B, Wenger C, Harsman A, Oeljeklaus S, Schneider A*, Warscheid B* (2017).
  Nat Commun, 8:15272-15272.
  *corresponding author
   
• Myofibrillar Z-discs are a protein phosphorylation hot spot with protein kinase C (PKCα) modulating protein dynamics.
  Reimann L, Wiese H, Leber Y, Schwäble AN, Fricke A, Rohland A, Knapp B, Peikert CD, Drepper F, van der Ven PFM, Radziwill G, Fürst DO, Warscheid, B.
  Mol Cell Proteomics. 2016;
   
• Regulation of peroxisome dynamics by phosphorylation. 
  Oeljeklaus S, Schummer A, Mastalski T, Platta WH, Warscheid B (2016).  
  Biochim Biophys Acta Mol Cell Res, 1863:1027-1037.
   
• Pex17p-dependent assembly of Pex14p/Dyn2p-subcomplexes of the peroxisomal protein import machinery. 
  Chan A, Schummer A, Fischer S, Bender J, Drepper F, Oeljeklaus S, Kunau WH, Girzalsky W, Warscheid B*, Erdmann R* (2016). 
  Eur J Cell Biol, 95(12):585-597. 
  *corresponding
   
• The non-canonical mitochondrial inner membrane presequence translocase of trypanosomatids contains two essential rhomboid-like proteins. 
  Harsman A, Oeljeklaus S, Wenger C, Huot JL, Warscheid B*, Schneider A*. 
  Nat Commun. 2016; 7:13707. 
  *corresponding author
   
• Mitochondrial protein synthesis adapts to influx of nuclear-encoded protein. 
  Richter-Dennerlein R, Oeljeklaus S, Lorenzi I, Ronsör C, Bareth B, Schendzielorz AB, Wang C, Warscheid B, Rehling P, Dennerlein S. 
  Cell. 2016;167(2):471-83.
   
• Mistargeted mitochondrial proteins activate a proteostatic response in the cytosol. Wrobel L, Topf U, Bragoszewski P, Wiese S, Sztolsztener ME, Oeljeklaus S, Varabyova A, Lirski M, Chroscicki P, Mroczek S, Januszewicz E, Dziembowski A, Koblowska M, Warscheid B*, Chacinska A.* (2015)
  Nature. 524(7566):485-8.
  *corresponding author
   
• Structural insights into cargo recognition by the yeast PTS1-receptor.
  Hagen S, Drepper F, Fischer S, Fodor K, Passon D, Platta H, Zimmermann B, Schliebs W, Girzalsky W, Wilmanns M, Warscheid B, Erdmann R (2015).
  J Biol Chem, 290:26610-26626.
   
• Functional Proteomics Identifies Acinus L as a Direct Insulin- and Amino Acid-Dependent Mammalian Target of Rapamycin Complex 1 (mTORC1) Substrate.
  Schwarz JJ, Wiese H, Tölle RC, Zarei M, Dengjel J, Warscheid B*, Thedieck K* (2015)
  Mol Cell Proteomics. 14(8):2042-55
  *corresponding author
   
• Quantitative phosphoproteomics reveals the protein tyrosine kinase Pyk2 as a central effector of olfactory receptor signaling in prostate cancer cells. 
  Wiese H, Gelis L, Wiese S, Reichenbach C, Jovancevic N, Osterloh M, Meyer HE, Neuhaus EM, Hatt H, Radziwill G, Warscheid B (2014)
  Biochim Biophys Acta, pii: S1570-9639(14)00225-8.
   
• Comparison of alternative MS/MS and bioinformatics approaches for confident phosphorylation site localization. 
  Wiese H, Kuhlmann K, Wiese S, Stoepel NS, Pawlas M, Meyer HE, Stephan C, Eisenacher M, Drepper F, Warscheid B (2014) 
  J Proteome Res. 13(2):1128-1137.
   
• The membrane proteome of sensory cilia to the depth of olfactory receptors. 
  Kuhlmann K, Tschapek A, Wiese H, Eisenacher M, Meyer HE, Hatt H, Oeljeklaus S, Warscheid B (2014) 
  Mol Cell Proteomics, 13:1828-43.
   
• A combined approach of quantitative interaction proteomics and live-cell imaging reveals a regulatory role for ER reticulon homology proteins in peroxisome biogenesis.
  David C, Koch JP, Oeljeklaus S, Laernsack A, Melchior S, Wiese S, Schummer A, Erdmann R, Warscheid B*, Brocard C* (2013) *corresponding authors
  Mol Cell Proteomics, 2013 May 20.
   
• Mitochondrial outer membrane proteome of Trypanosoma brucei reveals novel factors required to maintain mitochondrial morphology. 
  Niemann M, Wiese S, Mani J, Chanfon A, Jackson C, Meisinger C, Warscheid B*, Schneider A* (2013). *corresponding authors
  Mol Cell Proteomics: M112.023093
   
• Identification of Core Components and Transient Interactors of the Peroxisomal Importomer by Dual-track SILAC Analysis.
  Oeljeklaus S, Reinartz BS, Wolf J, Wiese S, Tonillo J, Podwojski K, Kuhlmann K, Stephan C, Meyer HE, Schliebs W, Brocard C, Erdmann R, Warscheid B (2012).
  J Proteome Res 11(4):2567-2580.
   
• MITRAC links mitochondrial protein translocation to respiratory-chain assembly and translational regulation.
  Mick DU, Dennerlein S, Wiese H, Reinhold R, Pacheau-Grau D, Lorenzi I, Sasarman F, Weraarpachai W, Shoubridge EA, Warscheid B, Rehling P (2012).
  Cell 151(7):1528-1541.
   
• New dimensions in the study of protein complexes using quantitative mass spectrometry. 
  Oeljeklaus S, Meyer HE, Warscheid B. 
  FEBS Lett. 2009; 583(11):1674-83.
   
• Characterization of mouse kidney peroxisomes by tandem mass spectrometry and protein correlation profiling.
  Wiese S, Gronemeyer T, Ofman R, Kunze M, Grou CP, Almeida JA, Eisenacher M, Stephan C, Hayen H, Schollenberger L, Korosec T, Waterham, HR, Schliebs W, Erdmann R, Berger J, Meyer HE, Just W, Azevedo JE, Wanders RJA, Warscheid B (2007).
  Mol Cell Proteomics 6(12):2045-57.
   
• Protein labeling by iTRAQ: A new tool for quantitative mass spectrometry in proteome research. 
  Wiese S, Reidegeld KA, Meyer HE, Warscheid B. 
  Proteomics. 2007; 7(3):340-50.

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