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Center for Computational and Theoretical Biology

Internal Transcribed Spacer 2 (ITS2)

  • {{I}{T}{S}2 {D}atabase {V}: {T}wice as {M}uch}. Ankenbrand, M. J.; Keller, A.; Wolf, M.; Schultz, J.; Forster, F. In Mol. Biol. Evol., 32(11), bll 3030–3032. 2015.
  • {{I}{T}{S}2 database {I}{V}: interactive taxon sampling for internal transcribed spacer 2 based phylogenies}. Koetschan, C.; Hackl, T.; Muller, T.; Wolf, M.; Forster, F.; Schultz, J. In Mol. Phylogenet. Evol., 63(3), bll 585–588. 2012.
  • {{T}he {I}{T}{S}2 {D}atabase}. Merget, B.; Koetschan, C.; Hackl, T.; Forster, F.; Dandekar, T.; Muller, T.; Schultz, J.; Wolf, M. In J Vis Exp, (61). 2012.
  • {{T}he {I}{T}{S}2 {D}atabase {I}{I}{I}--sequences and structures for phylogeny}. Koetschan, C.; Forster, F.; Keller, A.; Schleicher, T.; Ruderisch, B.; Schwarz, R.; Muller, T.; Wolf, M.; Schultz, J. In Nucleic Acids Res., 38, bll D275–279. 2010.
  • {{I}ncluding {R}{N}{A} secondary structures improves accuracy and robustness in reconstruction of phylogenetic trees}. Keller, A.; Forster, F.; Muller, T.; Dandekar, T.; Schultz, J.; Wolf, M. In Biol. Direct, 5, bl 4. 2010.
  • {5.8{S}-28{S} r{R}{N}{A} interaction and {H}{M}{M}-based {I}{T}{S}2 annotation}. Keller, A.; Schleicher, T.; Schultz, J.; Muller, T.; Dandekar, T.; Wolf, M. In Gene, 430, bll 50–57. 2009.
  • {{I}{T}{S}2 sequence-structure analysis in phylogenetics: a how-to manual for molecular systematics}. Schultz, J.; Wolf, M. In Mol. Phylogenet. Evol., 52, bll 520–523. 2009.
  • {{T}he {I}{T}{S}2 {D}atabase {I}{I}: homology modelling {R}{N}{A} structure for molecular systematics}. Selig, C.; Wolf, M.; Muller, T.; Dandekar, T.; Schultz, J. In Nucleic Acids Res., 36, bll D377–380. 2008.
  • {{D}istinguishing species}. Muller, T.; Philippi, N.; Dandekar, T.; Schultz, J.; Wolf, M. In RNA, 13, bll 1469–1472. 2007.
  • {{T}he internal transcribed spacer 2 database--a web server for (not only) low level phylogenetic analyses}. Schultz, J.; Muller, T.; Achtziger, M.; Seibel, P. N.; Dandekar, T.; Wolf, M. In Nucleic Acids Res., 34, bll W704–707. 2006.
  • {4{S}{A}{L}{E}--a tool for synchronous {R}{N}{A} sequence and secondary structure alignment and editing}. Seibel, P. N.; Muller, T.; Dandekar, T.; Schultz, J.; Wolf, M. In BMC Bioinformatics, 7, bl 498. 2006.
  • {{A} common core of secondary structure of the internal transcribed spacer 2 ({I}{T}{S}2) throughout the {E}ukaryota}. Schultz, J.; Maisel, S.; Gerlach, D.; Muller, T.; Wolf, M. In RNA, 11, bll 361–364. 2005.
  • {{H}omology modeling revealed more than 20,000 r{R}{N}{A} internal transcribed spacer 2 ({I}{T}{S}2) secondary structures}. Wolf, M.; Achtziger, M.; Schultz, J.; Dandekar, T.; Muller, T. In RNA, 11, bll 1616–1623. 2005.