Priv.-Doz. Dr. Sören Doose



List of publications

2021[ to top ]
  • Upregulation of CD38 expression on multiple myeloma cells by novel HDAC6 inhibitors is a class effect and augments the efficacy of daratumumab García-Guerrero, Estefanía; Götz, Ralph; Doose, Sören; Sauer, Markus; Rodríguez-Gil, Alfonso; Nerreter, Thomas; Kortüm, K. Martin; Pérez-Simón, José A.; Einsele, Hermann; Hudecek, Michael; Danhof, Sophia in Leukemia (2021). 35(1) 201–214.
2020[ to top ]
  • Whole-cell imaging of plasma membrane receptors by 3D lattice light-sheet dSTORM Wäldchen, Felix; Schlegel, Jan; Götz, Ralph; Luciano, Michael; Schnermann, Martin; Doose, Sören; Sauer, Markus in Nature Communications (2020). 11(1) 887-.
  • Super-resolution imaging reveals the nanoscale organization of metabotropic glutamate receptors at presynaptic active zones Siddig, Sana; Aufmkolk, Sarah; Doose, Sören; Jobin, Marie-Lise; Werner, Christian; Sauer, Markus; Calebiro, Davide in Sci Adv (2020). 6(16) eaay7193-.
2019[ to top ]
  • Super-Resolution Microscopy Reveals Local Accumulation of Plasma Membrane Gangliosides at Neisseria meningitidis Invasion Sites Schlegel, Jan; Peters, Simon; Doose, Sören; Schubert-Unkmeir, Alexandra; Sauer, Markus in Frontiers in Cell and Developmental Biology (2019). 7 194-.
  • Super-resolution microscopy reveals ultra-low CD19 expression on myeloma cells that triggers elimination by CD19 CAR-T Nerreter, Thomas; Letschert, Sebastian; Götz, Ralph; Doose, Sören; Danhof, Sophia; Einsele, Hermann; Sauer, Markus; Hudecek, Michael in Nature Communications (2019). 10(1) 3137-.
  • Bioorthogonal labeling with tetrazine-dyes for super-resolution microscopy Beliu, Gerti; Kurz, Andreas J.; Kuhlemann, Alexander C.; Behringer-Pliess, Lisa; Meub, Mara; Wolf, Natalia; Seibel, Jürgen; Shi, Zhen-Dan; Schnermann, Martin; Grimm, Jonathan B.; Lavis, Luke D.; Doose, Sören; Sauer, Markus in Communications Biology (2019). 2(1) 261-.
  • Registration and Visualization of Correlative Super-Resolution Microscopy Data Reinhard, Sebastian; Aufmkolk, Sarah; Sauer, Markus; Doose, Sören in Biophysical Journal (2019). 116(11) 2073–2078.
2018[ to top ]
  • Bioorthogonal Click Chemistry Enables Site-specific Fluorescence Labeling of Functional NMDA Receptors for Super-Resolution Imaging Neubert, Franziska; Beliu, Gerti; Terpitz, Ulrich; Werner, Christian; Geis, Christian; Sauer, Markus; Doose, Sören in Angewandte Chemie International Edition (2018). 57(50) 16364–16369.
  • HyphaTracker: An ImageJ toolbox for time-resolved analysis of spore germination in filamentous fungi Brunk, Michael; Sputh, Sebastian; Doose, Sören; van de Linde, Sebastian; Terpitz, Ulrich in Scientific Reports (2018). 8(1) 605-.
  • Nanostructure of DNA repair foci revealed by superresolution microscopy Sisario, Dmitri; Memmel, Simon; Doose, Sören; Neubauer, Julia; Zimmermann, Heiko; Flentje, Michael; Djuzenova, Cholpon S.; Sauer, Markus; Sukhorukov, Vladimir L. in The FASEB Journal (2018). fj.201701435-.
  • Human Autoantibodies against the AMPA Receptor Subunit GluA2 Induce Receptor Reorganization and Memory Dysfunction Haselmann, Holger; Mannara, Francesco; Werner, Christian; Planagumà, Jesús; Miguez-Cabello, Federico; Schmidl, Lars; Grünewald, Benedikt; Petit-Pedrol, Mar; Kirmse, Knut; Classen, Joseph; Demir, Fatih; Klöcker, Nikolaj; Soto, David; Doose, Sören; Dalmau, Josep; Hallermann, Stefan; Geis, Christian in Neuron (2018). 100(1) 91–105.e9.
  • β Cell-specific deletion of guanylyl cyclase A, the receptor for atrial natriuretic peptide, accelerates obesity-induced glucose intolerance in mice Tauscher, Sabine; Nakagawa, Hitoshi; Völker, Katharina; Werner, Franziska; Krebes, Lisa; Potapenko, Tamara; Doose, Sören; Birkenfeld, Andreas L.; Baba, Hideo A.; Kuhn, Michaela in Cardiovascular Diabetology (2018). 17 103.
2017[ to top ]
  • Gephyrin-binding peptides visualize postsynaptic sites and modulate neurotransmission Maric, Hans Michael; Hausrat, Torben Johann; Neubert, Franziska; Dalby, Nils Ole; Doose, Sören; Sauer, Markus; Kneussel, Matthias; Strømgaard, Kristian in Nature Chemical Biology (2017). 13 153-.
  • Characterization of Plasma Membrane Ceramides by Super-Resolution Microscopy Burgert, Anne; Schlegel, Jan; Bécam, Jérôme; Doose, Sören; Bieberich, Erhard; Schubert-Unkmeir, Alexandra; Sauer, Markus in Angewandte Chemie (2017).
2016[ to top ]
  • Human autoantibodies to amphiphysin induce defective presynaptic vesicle dynamics and composition Werner, Christian; Pauli, Martin; Doose, Sören; Weishaupt, Andreas; Haselmann, Holger; Grünewald, Benedikt; Sauer, Markus; Heckmann, Manfred; Toyka, Klaus V.; Asan, Esther; Sommer, Claudia; Geis, Christian in Brain (2016). 139(2) 365–379.
  • Super-resolution imaging of plasma membrane proteins with click chemistry Mateos-Gil, Pablo; Letschert, Sebastian; Doose, Soeren; Sauer, Markus in Frontiers in Cell and Developmental Biology (2016). 4 98-.
2015[ to top ]
  • Artifacts in single-molecule localization microscopy Burgert, Anne; Letschert, Sebastian; Doose, Sören; Sauer, Markus in Histochemistry and Cell Biology (2015). 144 123–131.
2014[ to top ]
  • Super-Resolution Imaging of Plasma Membrane Glycans Letschert, Sebastian; Göhler, Antonia; Franke, Christian; Bertleff-Zieschang, Nadja; Memmel, Elisabeth; Doose, Sören; Seibel, Jürgen; Sauer, Markus in Angewandte Chemie International Edition (2014). n/a-n/a.
2013[ to top ]
  • Systematic evaluation of fluorescence correlation spectroscopy data analysis on the nanosecond time scale Steger, Katrin; Bollmann, Stefan; Noe, Frank; Doose, Soren in Phys. Chem. Chem. Phys. (2013). -.
  • Investigating infection processes with a workflow from organic chemistry to biophysics: the combination of metabolic glycoengineering, super-resolution fluorescence imaging and proteomics Seibel, Jürgen; König, Simone; Göhler, Antonia; Doose, Sören; Memmel, Elisabeth; Bertleff, Nadja; Sauer, Markus in Expert Rev Proteomics (2013). 10(1) 25–31.
  • Methylene blue- and thiol-based oxygen depletion for super-resolution imaging Schäfer, Philip; van de Linde, Sebastian; Lehmann, Julian; Sauer, Markus; Doose, Sören in Analytical Chemistry (2013). 85(6) 3393–3400.
2012[ to top ]
  • Correlation-Matrix Analysis of Two-Color Coincidence Events in Single-Molecule Fluorescence Experiments Yahiatène, Idir; Doose, Sören; Huser, Thomas; Sauer, Markus in Analytical Chemistry (2012). 84(6) 2729–2736.
  • Analysis of homodimeric avian and human galectins by two methods based on fluorescence spectroscopy: Different structural alterations upon oxidation and ligand binding Göhler, Antonia; Büchner, Claudia; André, Sabine; Doose, Sören; Kaltner, Herbert; Gabius, Hans-Joachim in Biochimie (2012). 94(12) 2649–2655.
2011[ to top ]
  • Dynamical fingerprints for probing individual relaxation processes in biomolecular dynamics with simulations and kinetic experiments Noe, Frank; Doose, Sören; Daidone, Isabella; Löllmann, Marc; Sauer, Markus; Chodera, John D.; Smith, Jeremy C. in Proceedings of the National Academy of Sciences (2011).
  • Photoinduced formation of reversible dye radicals and their impact on super-resolution imaging van de Linde, Sebastian; Krstic, Ivan; Prisner, Thomas; Doose, Soren; Heilemann, Mike; Sauer, Markus in Photochem. Photobiol. Sci. (2011). 10(4) 499–506.
  • Dimer formation of organic fluorophores reports on biomolecular dynamics under denaturing conditions Bollmann, Stefan; Lollmann, Marc; Sauer, Markus; Doose, Soren in Phys. Chem. Chem. Phys. (2011). 13(28) 12874–12882.
  • Conformational Flexibility of Glycosylated Peptides Bollmann, Stefan; Burgert, Anne; Plattner, Carolin; Nagel, Lilly; Sewald, Norbert; Löllmann, Marc; Sauer, Markus; Doose, Sören in ChemPhysChem (2011). 12(16) 2907–2911.
  • Sensing ligand binding to a clinically relevant lectin by tryptophan fluorescence anisotropy Gohler, Antonia; Buchner, Claudia; Andre, Sabine; Doose, Soren; Kaltner, Herbert; Gabius, H.-J. in Analyst (2011). 136(24) 5270–5276.
2010[ to top ]
  • Hydrogen-Bond Driven Loop-Closure Kinetics in Unfolded Polypeptide Chains Daidone, Isabella; Neuweiler, Hannes; Doose, Sören; Sauer, Markus; Smith, Jeremy C. in PLOS COMPUTATIONAL BIOLOGY (2010). 6(1)
  • Hydrodynamic Properties of Human Adhesion/Growth-Regulatory Galectins Studied by Fluorescence Correlation Spectroscopy Goehler, Antonia; Andre, Sabine; Kaltner, Herbert; Sauer, Markus; Gabius, Hans-Joachim; Doose, Sören in BIOPHYSICAL JOURNAL (2010). 98(12) 3044–3053.
2009[ to top ]
  • Fluorescence Quenching by Photoinduced Electron Transfer: A Reporter for Conformational Dynamics of Macromolecules Doose, Sören; Neuweiler, Hannes; Sauer, Markus in CHEMPHYSCHEM (2009). 10(9-10, Sp. Iss. SI) 1389–1398.
2008[ to top ]
  • Importance of Backbone and Solvent Properties for Conformational Dynamics in Polypeptides Doose, Sören in CHEMPHYSCHEM (2008). 9(18) 2687–2689.
  • Reconfigurable, braced, three-dimensional DNA nanostructures Goodman, Russell P.; Heilemann, Mike; Doose, Sören; Erben, Christoph M.; Kapanidis, Achillefs N.; Turberfield, Andrew J. in NATURE NANOTECHNOLOGY (2008). 3(2) 93–96.
  • Changes in conformational dynamics of mRNA upon AtGRP7 binding studied by fluorescence correlation spectroscopy Schuettpelz, Mark; Schoening, Jan C.; Doose, Sören; Neuweiler, Hannes; Peters, Elisabeth; Staiger, Dorothee; Sauer, Markus in JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2008). 130(29) 9507–9513.
2007[ to top ]
  • Optical amplification from single excitons in collodial quantum dots Doose, Sören in SMALL (2007). 3(11) 1856–1858.
  • Probing polyproline structure and dynamics by photoinduced electron transfer provides evidence for deviations from a regular polyproline type II helix Doose, Sören; Neuweiler, Hannes; Barsch, Hannes; Sauer, Markus in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007). 104(44) 17400–17405.
  • Periodic acceptor excitation spectroscopy of single molecules Doose, Sören; Heilemann, Mike; Michalet, Xavier; Weiss, Shimon; Kapanidis, Achillefs in European Biophysics Journal (2007). 36(6) 669–674.
  • Dynamics of unfolded polypeptide chains in crowded environment studied by fluorescence correlation spectroscopy Neuweiler, Hannes; Lollmann, Marc; Doose, Sören; Sauer, Markus in JOURNAL OF MOLECULAR BIOLOGY (2007). 365(3) 856–869.
  • Single-Molecule Fluorescence Resonance Energy Transfer in Nanopipets: Improving Distance Resolution and Concentration Range Vogelsang, Jan; Doose, Sören; Sauer, Markus; Tinnefeld, Philip in ANALYTICAL CHEMISTRY (2007). 79(19) 7367–7375.
  • Polymer properties of polythymine as revealed by translational diffusion Doose, Sören; Barsch, Hannes; Sauer, Markus in BIOPHYSICAL JOURNAL (2007). 93(4) 1224–1234.
2006[ to top ]
  • The initial step of DNA hairpin folding: a kinetic analysis using fluorescence correlation spectroscopy Kim, J; Doose, S; Neuweiler, H; Sauer, M in NUCLEIC ACIDS RESEARCH (2006). 34(9) 2516–2527.
  • Rotational and translational diffusion of peptide-coated CdSe/CdS/ZnS nanorods studied by fluorescence correlation spectroscopy Tsay, JM; Doose, S; Weiss, S in JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2006). 128(5) 1639–1647.
  • Advances in fluorescence imaging with quantum dot bio-probes Pinaud, F; Michalet, X; Bentolila, LA; Tsay, JM; Doose, S; Li, JJ; Iyer, G; Weiss, S in BIOMATERIALS (2006). 27(9) 1679–1687.
2005[ to top ]
  • A microscopic view of miniprotein folding: Enhanced folding efficiency through formation of an intermediate Neuweiler, H; Doose, S; Sauer, M in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005). 102(46) 16650–16655.
  • Enhancing the photoluminescence of peptide-coated nanocrystals with shell composition and UV irradiation Tsay, JM; Doose, S; Pinaud, F; Weiss, S in JOURNAL OF PHYSICAL CHEMISTRY B (2005). 109(5) 1669–1674.
  • Quantum dots for live cells, in vivo imaging, and diagnostics Michalet, X; Pinaud, FF; Bentolila, LA; Tsay, JM; Doose, S; Li, JJ; Sundaresan, G; Wu, AM; Gambhir, SS; Weiss, S in SCIENCE (2005). 307(5709) 538–544.
  • Retention of transcription initiation factor sigma(70) in transcription elongation: Single-molecule analysis Kapanidis, AN; Margeat, E; Laurence, TA; Doose, S; Ho, SO; Mukhopadhyay, J; Kortkhonjia, E; Mekler, V; Ebright, RH; Weiss, S in MOLECULAR CELL (2005). 20(3) 347–356.
  • Comparison of photophysical and colloidal properties of biocompatible semiconductor nanocrystals using fluorescence correlation spectroscopy Doose, S; Tsay, JM; Pinaud, F; Weiss, S in ANALYTICAL CHEMISTRY (2005). 77(7) 2235–2242.
  • A close look at fluorescence quenching of organic dyes by tryptophan Doose, S; Neuweiler, H; Sauer, M in CHEMPHYSCHEM (2005). 6(11) 2277–2285.
2004[ to top ]
  • Fluorescence-aided molecule sorting: Analysis of structure and interactions by alternating-laser excitation of single molecules Kapanidis, AN; Lee, NK; Laurence, TA; Doose, S; Margeat, E; Weiss, S in PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004). 101(24) 8936–8941.
2003[ to top ]
  • The power and prospects of fluorescence microscopies and spectroscopies Michalet, X; Kapanidis, AN; Laurence, T; Pinaud, F; Doose, S; Pflughoefft, M; Weiss, S in ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE (2003). 32 161–182.