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Chair of Bioinformatics

inGeno

inGeno allows rapid comparison between two genomes including genome rearrangement, species specific island and protein functions.

Download: inGeno


Features:

  1. Dot-analysis and plot the results
  2. User-friendly comparison interface
  3. Gene information retrieval.
  4. Linear regression and heuristic locus collinear blocks (LCB) recognition process
  5. Pseudo-positive orthologous genes reducing procedure (low-noise control)
  6. Color clusters re-definition using easy-used control panel.
  7. Text-mining operations helpful for precisely extracting the gene information.
  8. A sequence conversion tool which can transform rich-format genome sequence files into proteome multi-FASTA format files, which is suitable for making a BLAST or Smith-Waterman analysis.
  9. Paracel GeneMatcher alignment report is supported, which make sense to obtain ideal sensitive results rapidly.

Contact information:

Prof. Dr. Thomas Dandekar: dandekar@biozentrum.uni-wuerzburg.de

Opens external link in new windowDr. Chunguang Liang

: liang@biozentrum.uni-wuerzburg.de

Tel.: +49 (0)931 318 4551
Tel.: +49 (0)931 318 4561
Fax: +49 (0)931 318 4552

Post: Bioinformatics Dept., Biocenter Am Hubland, University of Wuerzburg, Germany
PLZ: D-97074